PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG048980.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 838aa MW: 94910.8 Da PI: 8.7573

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG048980.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.1e-20	73	156	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Y eY++++GF v+k++s++ +g +++tfvC+k g ++ + + r+r + +tgCka+++vk + +++wev +eleHnH+++ TRIDC2AG048980.3 73 YLEYGYRAGFGVSKRTSHSV--DGVKYRATFVCYKGGIARIKPGL---KARRRLVAKTGCKAMMVVKYNAsENHWEVVFVELEHNHPCN 156 99***********99988..9999**********99887...8999*************99*************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 838 aa Download sequence
MSYGYVDPGF WLPSVGAMDS LQSDPYTRSS LQMQLIDTST SFETSNLDSV KHEVPTPQVG 60 MTFETVDLAY QSYLEYGYRA GFGVSKRTSH SVDGVKYRAT FVCYKGGIAR IKPGLKARRR 120 LVAKTGCKAM MVVKYNASEN HWEVVFVELE HNHPCNPEMV RFMMCFKDLP DWQREHRPFN 180 AKTRLNPKIH SGRGRPPNQN KDFMVRSFSQ SNYSIEAAAK CGKLRFAEGD VEALLVFFDK 240 MQAQNSNFFY NWDMDDEGRL KNVCWVDARS RAAYQHFSDV VCFDTVYLTY QFVIPLVAFL 300 GINHHGQFVL LGCGLLGDES PETFSWLFKK WLKCMNDKAP EAIITTHSRP VVKAVSEVFL 360 NTRHRYNLWH IMKELPDMSG RVEDKEAISL RMKKVVYDTI TAADFEREWV EMANQYKLHD 420 NRWLTTLFEE RAKWVPAYVK DAFWAGISTV RRSERLEAFF DGYITPETTI KIFIEQFDTA 480 MKLRSDREAY DDFRSFQQRP QALSGLLFEE QFANAYTINI FQKFQDQLKQ LMNVTCTEVS 540 RNGSIVTYTV TVIGKERKFD YRVMYNSAEK EVWCICRSLQ FKGILCSHAL AVLKQELVML 600 IPSKYILDRW RKDYKCPEES KETPIPPESA KATGKGTKPE NVREDKVDNL YNDGHQYFAD 660 IVEMGATDPD AMEYVLSVMK EAKEKVRRFE ESRKEKRPEG NPVSSSKKGA KSAKPPSAED 720 VGNSTSVSAP ANTAMATVAP TMMVAAASAT LAASTPMPVP SCTQMSVPPT MMAMATTSAA 780 VPPGMFLVPM HPHMVFPPFT PGLPAAVPPV APPPAPTANA VGVVSNPTKK RKKRKGNS

Sequence ? help Back to Top

Protein Sequence Length: 838 aa Download sequence

MSYGYVDPGF WLPSVGAMDS LQSDPYTRSS LQMQLIDTST SFETSNLDSV KHEVPTPQVG  60
MTFETVDLAY QSYLEYGYRA GFGVSKRTSH SVDGVKYRAT FVCYKGGIAR IKPGLKARRR  120
LVAKTGCKAM MVVKYNASEN HWEVVFVELE HNHPCNPEMV RFMMCFKDLP DWQREHRPFN  180
AKTRLNPKIH SGRGRPPNQN KDFMVRSFSQ SNYSIEAAAK CGKLRFAEGD VEALLVFFDK  240
MQAQNSNFFY NWDMDDEGRL KNVCWVDARS RAAYQHFSDV VCFDTVYLTY QFVIPLVAFL  300
GINHHGQFVL LGCGLLGDES PETFSWLFKK WLKCMNDKAP EAIITTHSRP VVKAVSEVFL  360
NTRHRYNLWH IMKELPDMSG RVEDKEAISL RMKKVVYDTI TAADFEREWV EMANQYKLHD  420
NRWLTTLFEE RAKWVPAYVK DAFWAGISTV RRSERLEAFF DGYITPETTI KIFIEQFDTA  480
MKLRSDREAY DDFRSFQQRP QALSGLLFEE QFANAYTINI FQKFQDQLKQ LMNVTCTEVS  540
RNGSIVTYTV TVIGKERKFD YRVMYNSAEK EVWCICRSLQ FKGILCSHAL AVLKQELVML  600
IPSKYILDRW RKDYKCPEES KETPIPPESA KATGKGTKPE NVREDKVDNL YNDGHQYFAD  660
IVEMGATDPD AMEYVLSVMK EAKEKVRRFE ESRKEKRPEG NPVSSSKKGA KSAKPPSAED  720
VGNSTSVSAP ANTAMATVAP TMMVAAASAT LAASTPMPVP SCTQMSVPPT MMAMATTSAA  780
VPPGMFLVPM HPHMVFPPFT PGLPAAVPPV APPPAPTANA VGVVSNPTKK RKKRKGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	829	833	KKRKK
2	829	835	KKRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-109	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG048980.3