PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG049110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 329aa    MW: 37119.3 Da    PI: 8.3572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG049110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM942.5e-29521951128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                       lp+G++F+Ptd el+ e+L+ kv +      ++  +   +i e+ +i++++P++Lp  +k + +  +fF+k +++y  gkrk+r+        
  TRIDC2AG049110.2  52 LPAGVKFDPTDLELL-EHLEGKVGRAAshvlID--DfipTIGEAqGICYTHPENLP-GIKMDGSTGHFFHKVSNAYVVGKRKRRKisnsdhtv 140
                       799************.99*****9998554422..23334777768**********.666778899******************867777766 PP

               NAM  78 .tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                         ++ +W++tgk++++l+++g  +g kk+Lv+y   ++   k+ekt+W mh+y+l
  TRIDC2AG049110.2 141 cDENIRWHKTGKSRSILDNNGVIKGWKKILVLYigyRKGGGKTEKTNWRMHQYHL 195
                       545788***************************65544555668*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
IEQSLIVTTK TIATMIIHPS LCQVEELLAW MECPNCKYRI DNTDVLSQWP GLPAGVKFDP  60
TDLELLEHLE GKVGRAASHV LIDDFIPTIG EAQGICYTHP ENLPGIKMDG STGHFFHKVS  120
NAYVVGKRKR RKISNSDHTV CDENIRWHKT GKSRSILDNN GVIKGWKKIL VLYIGYRKGG  180
GKTEKTNWRM HQYHLGVDQD EKQEELVVSK VFYQVQSMNA GQSLVCGVSE EFDSFAGEDD  240
PTTTMTYPLQ TRCPNGSPSG TEQNQPWNGS LEARRMPWRT HHCLAWMNTC QAAGPPTLTL  300
RGSLCRLTRR RSRSCPTSER LRISPFHPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132KRKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.19e-69NAC family protein