PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG049180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 402aa MW: 44647.3 Da PI: 6.263

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG049180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.2	3e-27	58	202	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp+G++F+Pt el+ e+L+ kv + + ++ + +e+ +i++++P++Lp +k + ++ +fF+k +++y g+rk+r+ TRIDC2AG049180.1 58 LPAGVKFDPTGLELL-EHLEGKVGRAPshdlIDDFIPtTEEAeGICYTHPENLP-GIKMDGRNNHFFHKVSNAYDVGQRKRRKisnsdhvvcD 148 799**********.99**99975442222222444457******.667788999**************85666666543 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128 + +W++tgk+k++l+++g +g kk+Lv+ ++++g kt+W+mh+y+l TRIDC2AG049180.1 149 VHFRWHKTGKSKKILDNNGVIKGWKKILVLMMRSRKDGItsrtKTNWTMHQYHL 202 3677***********************655554433333*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
RFNGSAIDST AARCKLFISS LVTTIVAVIR NPTHPPPSQI ECPNCKYHID VLSQWPGLPA 60 GVKFDPTGLE LLEHLEGKVG RAPSHDLIDD FIPTTEEAEG ICYTHPENLP GIKMDGRNNH 120 FFHKVSNAYD VGQRKRRKIS NSDHVVCDVH FRWHKTGKSK KILDNNGVIK GWKKILVLMM 180 RSRKDGITSR TKTNWTMHQY HLGVDQDEKH GELVVSKVFY QSKKDEQSVM CLVNEESDPF 240 AGKIDPTTPM TYPPQPRPPN SSPSRTEKNQ EEHVALSGPD ERPSRGATPD FVYPEMQPFP 300 LGLDALQGLP DPKIPLGFSH MASWFAGTSS HSNALEDAPL SCLDERLPHG GTLDAAYPDP 360 EGQALPLDAE ALQGLPDFGT PSNIFPQDLQ FGSQDIFWGE GF

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

RFNGSAIDST AARCKLFISS LVTTIVAVIR NPTHPPPSQI ECPNCKYHID VLSQWPGLPA  60
GVKFDPTGLE LLEHLEGKVG RAPSHDLIDD FIPTTEEAEG ICYTHPENLP GIKMDGRNNH  120
FFHKVSNAYD VGQRKRRKIS NSDHVVCDVH FRWHKTGKSK KILDNNGVIK GWKKILVLMM  180
RSRKDGITSR TKTNWTMHQY HLGVDQDEKH GELVVSKVFY QSKKDEQSVM CLVNEESDPF  240
AGKIDPTTPM TYPPQPRPPN SSPSRTEKNQ EEHVALSGPD ERPSRGATPD FVYPEMQPFP  300
LGLDALQGLP DPKIPLGFSH MASWFAGTSS HSNALEDAPL SCLDERLPHG GTLDAAYPDP  360
EGQALPLDAE ALQGLPDFGT PSNIFPQDLQ FGSQDIFWGE GF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	160	RKRRKISNSDHVVCDVHFRWHKTGKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	1e-57	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG049180.1