PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG049180.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 270aa    MW: 30798.1 Da    PI: 8.921
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG049180.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.51.2e-27521961128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 
                       lp+G++F+Pt  el+ e+L+ kv + +    ++ +    +e+ +i++++P++Lp  +k + ++ +fF+k +++y  g+rk+r+          
  TRIDC2AG049180.2  52 LPAGVKFDPTGLELL-EHLEGKVGRAPshdlIDDFIPtTEEAeGICYTHPENLP-GIKMDGRNNHFFHKVSNAYDVGQRKRRKisnsdhvvcD 142
                       799************.99******99975442222222444457**********.667788999******************85666666543 PP

               NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkge....ktdWvmheyrl 128
                        + +W++tgk+k++l+++g  +g kk+Lv+   ++++g     kt+W+mh+y+l
  TRIDC2AG049180.2 143 VHFRWHKTGKSKKILDNNGVIKGWKKILVLMMRSRKDGItsrtKTNWTMHQYHL 196
                       3677***************************655554433333*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MITKIDLSHR FISSLVTTIV AVIRNPTHPP PSQIECPNCK YHIDVLSQWP GLPAGVKFDP  60
TGLELLEHLE GKVGRAPSHD LIDDFIPTTE EAEGICYTHP ENLPGIKMDG RNNHFFHKVS  120
NAYDVGQRKR RKISNSDHVV CDVHFRWHKT GKSKKILDNN GVIKGWKKIL VLMMRSRKDG  180
ITSRTKTNWT MHQYHLGVDQ DEKHGELVVS KVFYQSKKDE QSVMCLVNEE SDPFAGKIDP  240
TTPMTYPPQP RPPNSSPSRT EKNQIKDQQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128154RKRRKISNSDHVVCDVHFRWHKTGKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56620.15e-60NAC family protein