PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG050150.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 561aa MW: 64481.4 Da PI: 7.8966

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG050150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.5	4.4e-23	11	103	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2AG050150.2 11 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 102 6**************97766.8999************9887777889999********************************987 PP FAR1 91 p 91 p TRIDC2AG050150.2 103 P 103 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MVFEDIGSVE EFYKSYAHHC GFSVRVGQRK LLNNEVVQWK RFMCSREGFR SEKCMGVDDP 60 SRKRKVRKVT RCGCDARIIV KRCTDNKYKI TSWIEHHNHG FVPPDKCHLI RSNRQLSDKV 120 KPTVSTHCKA STCTSQANKP DHVSEGRSDN VGCTKRDLQK YHHDLCSKIK NEDAQIFVAQ 180 LCRKQQEDSA FFFDCDVDDQ GMLVHVFWAD ATSRKNYIYF SDMLTFDCTN TLNQHGMIFA 240 PFTGTNHHLQ SVFFGAAFLA DEKIESYAWL FQTFLRVMGG VSPKTIVTRE NDRMKAAISN 300 VLPATTHRLC MLEMLERMPE KVEPSLRNNP LFQTRMNECV LGSETVFEFE SKWESIISDF 360 GLQGNQWLAE RYSARERWIL AYSTDIHLSG ILRSTAWSKS AKSFFNCFIN QKLSLVEFWL 420 RFEAALECQR QEESNADHTS AHTTPQLITP WGLEKHGSVV FTHEVFERFQ EEIVAARDHC 480 VVEDMAQTEG VKTVAIGGDD SDKVREVRWD AITMTANCSC KLFESVGIPC RHINLVLRSS 540 KLNELPSSCV LKRWQKSAKF G

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MVFEDIGSVE EFYKSYAHHC GFSVRVGQRK LLNNEVVQWK RFMCSREGFR SEKCMGVDDP  60
SRKRKVRKVT RCGCDARIIV KRCTDNKYKI TSWIEHHNHG FVPPDKCHLI RSNRQLSDKV  120
KPTVSTHCKA STCTSQANKP DHVSEGRSDN VGCTKRDLQK YHHDLCSKIK NEDAQIFVAQ  180
LCRKQQEDSA FFFDCDVDDQ GMLVHVFWAD ATSRKNYIYF SDMLTFDCTN TLNQHGMIFA  240
PFTGTNHHLQ SVFFGAAFLA DEKIESYAWL FQTFLRVMGG VSPKTIVTRE NDRMKAAISN  300
VLPATTHRLC MLEMLERMPE KVEPSLRNNP LFQTRMNECV LGSETVFEFE SKWESIISDF  360
GLQGNQWLAE RYSARERWIL AYSTDIHLSG ILRSTAWSKS AKSFFNCFIN QKLSLVEFWL  420
RFEAALECQR QEESNADHTS AHTTPQLITP WGLEKHGSVV FTHEVFERFQ EEIVAARDHC  480
VVEDMAQTEG VKTVAIGGDD SDKVREVRWD AITMTANCSC KLFESVGIPC RHINLVLRSS  540
KLNELPSSCV LKRWQKSAKF G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	89	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG050150.2