PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG050150.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 833aa    MW: 95282.9 Da    PI: 9.0642
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG050150.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.95.9e-2212102291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY+++A++vGF vr+ ++k    ++ + +++++Cs +g+r+e+ k+   + +++r+r++tr+gC+a++ vk+ + ++++++++ ++HnH ++p
  TRIDC2AG050150.3  12 FYKAFAHRVGFGVRVGQQKVV--DNVVESKRYMCSSQGFRSEKVKRnvkAANKKRKREVTRCGCDAHIYVKRCSGNTYKIHSMIEQHNHGFVP 102
                       9***************99888..889****************9999787788999**********************************9875 PP
2FAR173.74.1e-23145235190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GF+vr+ ++k   +++ +  ++f+Cs+eg+r+++ k+  +e+++r+ ++tr+gC+a+++vk  + ++++v++l ++HnH l+
  TRIDC2AG050150.3 145 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGKDpsSERKKRNVKVTRCGCNAHIVVKWCSGNTYKVSSLIEHHNHGLV 235
                       6****************99887.777799****************9987888889999*******************************986 PP
3FAR172.77.8e-23283375191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YA+++GFsvr+ + k   +n+ + +++f+Cs+eg+r+e+       +++r+ r++tr+gC+a++ vk+ +d+k+++t+  ++HnH ++
  TRIDC2AG050150.3 283 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 374
                       6****************97766.8999****************9887777889999**********************************987 PP

              FAR1  91 p 91 
                       p
  TRIDC2AG050150.3 375 P 375
                       5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MTFEGLEAVE AFYKAFAHRV GFGVRVGQQK VVDNVVESKR YMCSSQGFRS EKVKRNVKAA  60
NKKRKREVTR CGCDAHIYVK RCSGNTYKIH SMIEQHNHGF VPPDKLHLIR SNRGASEKEK  120
VIPECDEALR PSLGMAFEGL SSAEEFYKSY ARHCGFKVRV GQHKLLNKEV VQFKRFMCSR  180
EGFRSDKGKD PSSERKKRNV KVTRCGCNAH IVVKWCSGNT YKVSSLIEHH NHGLVLPDKV  240
TKSKRRVSEK AKNKLSSSLA PECDEALKPS VGMVFEDIGS VEEFYKSYAH HCGFSVRVGQ  300
RKLLNNEVVQ WKRFMCSREG FRSEKCMGVD DPSRKRKVRK VTRCGCDARI IVKRCTDNKY  360
KITSWIEHHN HGFVPPDKCH LIRSNRQLSD KVKPTVSTHC KASTCTSQAN KPDHVSEGRS  420
DNVGCTKRDL QKYHHDLCSK IKNEDAQIFV AQLCRKQQED SAFFFDCDVD DQGMLVHVFW  480
ADATSRKNYI YFSDMLTFDC TNTLNQHGMI FAPFTGTNHH LQSVFFGAAF LADEKIESYA  540
WLFQTFLRVM GGVSPKTIVT RENDRMKAAI SNVLPATTHR LCMLEMLERM PEKVEPSLRN  600
NPLFQTRMNE CVLGSETVFE FESKWESIIS DFGLQGNQWL AERYSARERW ILAYSTDIHL  660
SGILRSTAWS KSAKSFFNCF INQKLSLVEF WLRFEAALEC QRQEESNADH TSAHTTPQLI  720
TPWGLEKHGS VVFTHEVFER FQEEIVAARD HCVVEDMAQT EGVKTVAIGG DDSDKVREVR  780
WDAITMTANC SCKLFESVGI PCRHINLVLR SSKLNELPSS CVLKRWQKSA KFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1334361RKRKVRKVTRCGCDARIIVKRCTDNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-100FAR1 family protein