PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG050150.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 589aa MW: 67443.9 Da PI: 7.7855

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG050150.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	4.8e-23	39	131	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2AG050150.5 39 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 130 6**************97766.8999************9887777889999********************************987 PP FAR1 91 p 91 p TRIDC2AG050150.5 131 P 131 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MVLTRSGFLM LQSSLAPECD EALKPSVGMV FEDIGSVEEF YKSYAHHCGF SVRVGQRKLL 60 NNEVVQWKRF MCSREGFRSE KCMGVDDPSR KRKVRKVTRC GCDARIIVKR CTDNKYKITS 120 WIEHHNHGFV PPDKCHLIRS NRQLSDKVKP TVSTHCKAST CTSQANKPDH VSEGRSDNVG 180 CTKRDLQKYH HDLCSKIKNE DAQIFVAQLC RKQQEDSAFF FDCDVDDQGM LVHVFWADAT 240 SRKNYIYFSD MLTFDCTNTL NQHGMIFAPF TGTNHHLQSV FFGAAFLADE KIESYAWLFQ 300 TFLRVMGGVS PKTIVTREND RMKAAISNVL PATTHRLCML EMLERMPEKV EPSLRNNPLF 360 QTRMNECVLG SETVFEFESK WESIISDFGL QGNQWLAERY SARERWILAY STDIHLSGIL 420 RSTAWSKSAK SFFNCFINQK LSLVEFWLRF EAALECQRQE ESNADHTSAH TTPQLITPWG 480 LEKHGSVVFT HEVFERFQEE IVAARDHCVV EDMAQTEGVK TVAIGGDDSD KVREVRWDAI 540 TMTANCSCKL FESVGIPCRH INLVLRSSKL NELPSSCVLK RWQKSAKFG

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MVLTRSGFLM LQSSLAPECD EALKPSVGMV FEDIGSVEEF YKSYAHHCGF SVRVGQRKLL  60
NNEVVQWKRF MCSREGFRSE KCMGVDDPSR KRKVRKVTRC GCDARIIVKR CTDNKYKITS  120
WIEHHNHGFV PPDKCHLIRS NRQLSDKVKP TVSTHCKAST CTSQANKPDH VSEGRSDNVG  180
CTKRDLQKYH HDLCSKIKNE DAQIFVAQLC RKQQEDSAFF FDCDVDDQGM LVHVFWADAT  240
SRKNYIYFSD MLTFDCTNTL NQHGMIFAPF TGTNHHLQSV FFGAAFLADE KIESYAWLFQ  300
TFLRVMGGVS PKTIVTREND RMKAAISNVL PATTHRLCML EMLERMPEKV EPSLRNNPLF  360
QTRMNECVLG SETVFEFESK WESIISDFGL QGNQWLAERY SARERWILAY STDIHLSGIL  420
RSTAWSKSAK SFFNCFINQK LSLVEFWLRF EAALECQRQE ESNADHTSAH TTPQLITPWG  480
LEKHGSVVFT HEVFERFQEE IVAARDHCVV EDMAQTEGVK TVAIGGDDSD KVREVRWDAI  540
TMTANCSCKL FESVGIPCRH INLVLRSSKL NELPSSCVLK RWQKSAKFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	117	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-102	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG050150.5