PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG050440.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 252aa MW: 27003.2 Da PI: 4.669

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG050440.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.5	2.4e-07	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e ++ C ++ lC+ C +++H H++ p TRIDC2AG050440.2 4 QCDACEGAAATVVCCADEAALCARCDVQIHAAnklaskHQRLP 46 6****99*******************6678888888877 PP
2	zf-B_box	30.2	9.4e-10	54	93	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ +++k++ fC d++ l+C+dC +++H + H TRIDC2AG050440.2 54 PRCDVCQDKPAFVFCVDDRALFCRDCDDSIHVQgtlsanH 93 89*****************************544555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MRIQCDACEG AAATVVCCAD EAALCARCDV QIHAANKLAS KHQRLPLEAA PGLPRCDVCQ 60 DKPAFVFCVD DRALFCRDCD DSIHVQGTLS ANHQRYIATG IHVGFSSVCS AHADTHPPPS 120 KPKAPPTAAP PRAAPVSAAA QEVPSSPFLP SSGWAVEDLL QFSDYESSDK SPSPLGFKEL 180 EWFADIDLFH DDQAPAPKWG RTAAEVPELF ASPQPASNTG FYKAAGARQS KKARVEMPDD 240 DDEDYLLVPD LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-60	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG050440.2