PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 316aa MW: 33121.7 Da PI: 6.9389

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.7	1e-07	27	63	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 r C+ + + ++lfC+ + +lC+ C H g H TRIDC2AG051230.2 27 RACDSCATEAARLFCRADAAFLCAGCDARAH-GagsrH 63 67*************************9999.435667 PP
2	zf-B_box	25.2	3.3e-08	66	111	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 + C+ +e+ ++ C+ + lC++C +H H++vp+ TRIDC2AG051230.2 66 VWLCEVCEHAPAAVTCKADAAVLCASCDADIHAAnplarrHERVPV 111 679*****************************66888889999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
ASSERVRAME GEEKPVVGGA YWGVGARACD SCATEAARLF CRADAAFLCA GCDARAHGAG 60 SRHARVWLCE VCEHAPAAVT CKADAAVLCA SCDADIHAAN PLARRHERVP VAPFFGTAAD 120 AHKPFVSSGA QAAAEDDGSN DAEAASWLLP EPDHKDGATA EVFFADSDHY LDLDFARSMD 180 DIKAISVQLN GQPEIDLNGG NKGFHSDHSM NHSVRIIPVL VHAQARPRRS CQRGGGAGGE 240 PGEGAGGAAD AVQGEAQEPA VREDHPVRVP QGVRRDAAPR QGPVRQAHGH GGRRRPGGAR 300 GDVLLSRGRR RRAHGA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	312	RRRPGGARGDVLLSRGRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24790.1	1e-39	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051230.2