PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG052680.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 199aa    MW: 22570.4 Da    PI: 7.8937
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG052680.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.5e-172670147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg++T++E+  +v+++ ++G++ W+tIar ++ gRt++++k++w+++
  TRIDC2AG052680.3 26 RGKMTPQEESTIVQLHSLWGNR-WSTIARSLP-GRTDNEIKNYWRTH 70
                      89********************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MWKCLKRSGK SCRLRWVNYL RPDLKRGKMT PQEESTIVQL HSLWGNRWST IARSLPGRTD  60
NEIKNYWRTH YKKGKPSKNI ERARARFLMQ RREMQQQQQQ QQQKLLLGQG KDVELASATA  120
EDDVDEKMTG NVGPAATALA DHGHEELIMQ DVLDFLCPMS CALLHSAGQS GSCGASTSEE  180
YGSTEDDGAT WGSLWNLED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13480.19e-42MYB family protein