PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053470.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 401aa    MW: 47122.1 Da    PI: 9.2251
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053470.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.3e-088465391
              FAR1 53 rtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
                      +++ + r++C a +++ ++kd+ w++++ +++HnH+l+p
  TRIDC2AG053470.2  8 ENTRSCRCECPALIRLLRTKDNGWYIAEHREQHNHSLSP 46
                      678899******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MQGKPGVENT RSCRCECPAL IRLLRTKDNG WYIAEHREQH NHSLSPTYGQ TIHWPSHKHI  60
DAYSRDLVEQ LRQNNVNLAK VHSIIGSFFG SMEKVPFTKR ALKNLCGKIN REQSEDDVRK  120
TMEVFAELGS RDPHFTYRVQ ADEDGRIATL MWANGSSRLQ YTFFGDVVTF DTTYRTNLYN  180
MPFGLFVGVN NHFQSIILAG VLVRDEKVET FEWVFIEFIR MMGETAPRTI LTGDQCRAME  240
VAIKNVMPQT AHRWCKWHVL KKAKESLGSL YSKKSEFRAE FHKVVNHMLT IDEFEEAWKI  300
LVEKYSLKTH DYMRQLYDIR HKWVKPYFKG VFCAKMSSTQ RSESANHMLK NYVPLGCPMH  360
MFVKKYMRLQ FDREAEENYE EKRTQIGRPL YRANLAIEAC W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-58FAR1 family protein