PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053470.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 315aa    MW: 35907.8 Da    PI: 7.7345
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053470.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.83.5e-1330110191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y+ e GF +r +ks+ + + +   +++ vC   gk+  e+++         + r++C a +++ ++kd+ w++++ +++HnH+l+p
  TRIDC2AG053470.7  30 DFYNLYSWEKGFGIRYEKSRLNVERT-KCMQEIVCGGAGKPGVENTR---------SCRCECPALIRLLRTKDNGWYIAEHREQHNHSLSP 110
                       6*****************99995444.67899****99999886555.........99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
AIRGFGDKPG SIVVVPELGT SFDTLGEAYD FYNLYSWEKG FGIRYEKSRL NVERTKCMQE  60
IVCGGAGKPG VENTRSCRCE CPALIRLLRT KDNGWYIAEH REQHNHSLSP TYGQTIHWPS  120
HKHIDAYSRD LVEQLRQNNV NLAKVHSIIG SFFGSMEKVP FTKRALKNLC GKINREQSED  180
DVRKTMEVFA ELGSRDPHFT YRVQADEDGR IATLMWANGS SRLQYTFFGD VVTFDTTYRT  240
NLYNMPFGLF VGVNNHFQSI ILAGVLVRDE KVETFEWVFI EFIRMMGETA PRTILTGVMP  300
SCKGTICANN VYSCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.16e-30FAR1 family protein