PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG053630.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 195aa    MW: 22010 Da    PI: 9.9336
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG053630.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.6e-091547133
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgk 33
                      +g W++eEd++l d++ ++G  +W+t++ + gk
  TRIDC2AG053630.6 15 KGLWSPEEDQKLRDYIVRYGHSCWSTVPVKAGK 47
                      678*************************99993 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MGCKSCQKPK AQHRKGLWSP EEDQKLRDYI VRYGHSCWST VPVKAGKNSL PAKRGRHFAR  60
DSPENFEGES GRFSSCLLAF MPKFRISPDF LPRLCKCTSA RGKGEDGELI SLELRLPWQV  120
GWGLNFAVNC RASEKRQELQ AAMDQLPEAG VEARHVLPGG GGDRHEPPRH TRQQVSIPST  180
HHNSHLFHPT FFGLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.12e-15MYB family protein