PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG054100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 451aa    MW: 48577.5 Da    PI: 9.5875
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG054100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-19200250256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  TRIDC2AG054100.1 200 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 250
                       59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
SSASGESGSG GGRGTGRRWK GKGVTPIQAR RQQQLAPVFE DASAALLRPL RKIGRSPDRL  60
HRTTSSLSTS SSSAPASPRS FPASDAVAPS ARHIFPFAYE PSATTARESP QLLRQYSSMS  120
QPASPPPQQP LRHQQMISFG GSPPCATQSF FMPAESTQQQ QHLLRYWSEA LNLSPRGGLA  180
GMPPSLYQQL LRAPPPPQKL YRGVRQRHWG KWVAEIRLPR NRTRLWLGTF DTAEDAAMAY  240
DREAFKLRGE NARLNFPDRF LGKGRAGGSG RTSATSSAAP SAAAGTASCS SSSSSPPQTS  300
DEAPANTQQA PRQREQQHAE WSTLENRAQH PPPTSIPQDG GSRDAATPYS AEMFHSSAPS  360
GGMWAQADES WFNAWGPGSS FWDYDMDDSA RSLFIHHPRF SGEDAGMSHP GAQETPPATA  420
AAGTSDTTCD DVPVTSSSVP PPETHQTPNF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.11e-37ERF family protein