PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055140.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 200aa    MW: 22156.7 Da    PI: 11.6271
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055140.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.4e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEd++lv  ++ +G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC2AG055140.4 14 RGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYL 61
                      89******************************99************97 PP
2Myb_DNA-binding53.65.1e-1767112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
  TRIDC2AG055140.4  67 RGNFTDEEEQSIIQLHQLLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MGRAPCCEKM GLKRGPWTPE EDKILVAHIH SHGHGNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TDEEEQSIIQ LHQLLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLDPGA  120
QEQLEEASAA KKRKKPAAAR QGGARAVLAR PLRLVHAHRV HVHGLGGGGA ARQLGQLRLR  180
LGVRQGGVLH LVRGVGGVPD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113135KKRLDPGAQEQLEEASAAKKRKK
2131135KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-76MYB family protein