PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055590.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 244aa    MW: 26607.2 Da    PI: 8.3068
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055590.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY204.25.1e-63282205170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.....qllaaeshldeslkee...................... 70 
                          eq+Cyv+CnfC+tilav vP +slfk+v+vrCGhC++llsvnl++       ++l+ +         +                      
  TRIDC2AG055590.2  28 AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVAVRCGHCANLLSVNLRNLLlpataNQLPFSP--------Sllsptspasphglldemssfqa 112
                       6789*****************************************99876333333333333........23333555688898888888876 PP

             YABBY  71 ...lleelkveeenlksnvekeesastsvssekl...senedeevprvpp...virPPekrqrvPsaynrfikeeiqrikasnPdishreafs 154
                          l  +++ + +  + + +++++a ++ +++++   ++  ++e+p+ +      + PekrqrvPsaynrfik+eiqrika+nPdi+hreafs
  TRIDC2AG055590.2 113 pssL-LTDQASPNVSSITSSSNSCAINTPAMSMMpppEKPAQRETPQRKSaasGTKHPEKRQRVPSAYNRFIKDEIQRIKANNPDITHREAFS 204
                       6632.233333333333444445555555566668885666666665544222689************************************* PP

             YABBY 155 aaaknWahfPkihfgl 170
                       aaaknWahfP+ihfgl
  TRIDC2AG055590.2 205 AAAKNWAHFPHIHFGL 220
                       **************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MMSSPAESET SFFPDHLAEQ QQQQPPFAEQ EQLCYVHCNF CDTILAVGVP CSSLFKTVAV  60
RCGHCANLLS VNLRNLLLPA TANQLPFSPS LLSPTSPASP HGLLDEMSSF QAPSSLLTDQ  120
ASPNVSSITS SSNSCAINTP AMSMMPPPEK PAQRETPQRK SAASGTKHPE KRQRVPSAYN  180
RFIKDEIQRI KANNPDITHR EAFSAAAKNW AHFPHIHFGL MPDQGLMRKT SIQSQLVSKG  240
GPKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-48YABBY family protein