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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG055610.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 339aa MW: 38687.5 Da PI: 6.9339 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 174.9 | 2.3e-54 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
+ppGfrFhPtdeelv++yL+kkv+ k+++l ++ik+vd+yk+ePwdL++ k+ + ++++w+fFs++dkky+tg+r+nrat++g+Wkatg+dk
TRIDC2AG055610.1 7 VPPGFRFHPTDEELVDYYLRKKVQLKRIDL-DIIKDVDLYKIEPWDLQErcKIGTeDQNDWFFFSHKDKKYPTGTRTNRATTAGFWKATGRDK 98
69****************************.99**************953444442455********************************** PP
NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
++++ k+ lvg++ktLvfykgrap+g+k dW+mheyrle
TRIDC2AG055610.1 99 PIYV-KHCLVGMRKTLVFYKGRAPNGQKLDWIMHEYRLE 136
****.899*****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 339 aa Download sequence |
MNAFSHVPPG FRFHPTDEEL VDYYLRKKVQ LKRIDLDIIK DVDLYKIEPW DLQERCKIGT 60 EDQNDWFFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI YVKHCLVGMR KTLVFYKGRA 120 PNGQKLDWIM HEYRLETNEN GAPHDEGWVV CKVFKKRVAT VQRMAATDSA FWFNNDHVAF 180 MAPRVDSPRQ AVHHLQNAAY HHGHHQTYHH PCKVELEYHQ LLPQEPASFL QLPQLEMPGL 240 PDLIGAVAAS LQPCNQTHDG QASRQLEIEP VYVTDASAGE WRDLDKFMAS QLSHDGSTPK 300 ESSSYANPAL AFQAEGKHEE ALDYVSASAS SGGDNGLWK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G12260.1 | 1e-111 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG055610.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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