PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG055810.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 193aa MW: 21427 Da PI: 10.3824

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG055810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.9	8.6e-19	58	111	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq e Le F+++r++ + ++ LA++lgL+ +qV vWFqNrRa++k TRIDC2AG055810.1 58 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHK 111 45689***********************************************99 PP
2	HD-ZIP_I/II	113.5	1.3e-36	58	149	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eq+++LE sF+ee+kLe+ rKv la eLgl+p+qvavWFqnrRAR+k+k lE+++++Lk+a+da ++++Le++v +L+e+l++ TRIDC2AG055810.1 58 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHKSKTLEQEFARLKHAHDAAILHKCHLENQVLRLKEKLRA 149 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDNQQLFGSS YVDTPFFAAN GTAQRESKPK ARRRRRRAAR CGGGDGNGWE MDGGGDPKKR 60 RLTDEQAEML ELSFREERKL ETGRKVYLAA ELGLDPKQVA VWFQNRRARH KSKTLEQEFA 120 RLKHAHDAAI LHKCHLENQV LRLKEKLRAT AEEVQRLRSA AGIHANGGDS AGAVSVCGGN 180 PGSSFSTGTC QQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	37	RRRRRR
2	32	40	RRRRRRAAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	5e-39	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG055810.1