PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG055820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 218aa MW: 24364.4 Da PI: 9.4732

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG055820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.5	1.1e-18	62	115	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq e Le F+++r++ + ++ LA++lgL+ +qV vWFqNrRa++k TRIDC2AG055820.1 62 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHK 115 45689***********************************************99 PP
2	HD-ZIP_I/II	114.1	8.4e-37	62	153	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eq+++LE sF+ee+kLe+ rKv la eLgl+p+qvavWFqnrRAR+k+k lE+++++Lk+a+da ++++Le+ev +L+e+l++ TRIDC2AG055820.1 62 KKRRLTDEQAEMLELSFREERKLETGRKVYLAAELGLDPKQVAVWFQNRRARHKSKTLEQEFARLKHAHDAAILHKCHLENEVLRLKEKLRA 153 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
REARDLSFPS TPCRQWSRCE HWPHGTAQRE SKPKARRRRR RAARCGGGDG NGWEMDGGGD 60 PKKRRLTDEQ AEMLELSFRE ERKLETGRKV YLAAELGLDP KQVAVWFQNR RARHKSKTLE 120 QEFARLKHAH DAAILHKCHL ENEVLRLKEK LRATAEEVQR LRSAAGIHAN GGDSAGAVSV 180 CGGNPGSSFS TGTCQQHPGF SGADVLGRDD DLMMCVPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	41	RRRRRR
2	36	44	RRRRRRAAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	2e-38	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG055820.1