PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055910.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 210aa    MW: 22637.7 Da    PI: 10.6555
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055910.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.51.1e-19128162135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2AG055910.5 128 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 162
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSDPMRTPTI CALSTEALVP VKAKRSKRSR ASGWSLSGPA PDSTSSSSTT TTSSCSSSAS  60
FSPYFLLDTP HFGASELMEE YNILPPPAKK SKHGKSSKQK VKKRGRKPKN LPAHPSSATE  120
ATQSDRRCSH CGVQKTPQWR AGPEGAKTLC NACGVRYKSG RLLPEYRPAC SPTYVSSVHS  180
NSHRKVLEMR RKKEDGPLTV TATAPAVASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-41GATA family protein