PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG056120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 232aa    MW: 25854.1 Da    PI: 6.1798
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG056120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.11.7e-1982135456
                       -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ft+eq++ Le++F+  + ++  +e++eLA++lgL+ rqV +WFqN+Ra+++
  TRIDC2AG056120.1  82 KRRFTEEQTRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 135
                       458**************9899********************************9 PP
2HD-ZIP_I/II123.69.3e-4080173193
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       e+krr+++eq ++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ +L+++l+
  TRIDC2AG056120.1  80 ERKRRFTEEQTRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFTALRADYDALHSRVESLKHEKLALAAQLQ 172
                       69******************999********************************************************************98 PP

       HD-ZIP_I/II  93 e 93 
                       e
  TRIDC2AG056120.1 173 E 173
                       7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
VGAEQWRPTG SVGMDYHHHH QQQQQFLMPP PASLPAQQQL CAPMMGMGME MGMEMEMEME  60
MEMEEQLCFV GRGGGGRGAE RKRRFTEEQT RSLESMFHAH HAKLEPREKA ELARELGLQP  120
RQVAIWFQNK RARWRSKQLE HDFTALRADY DALHSRVESL KHEKLALAAQ LQELSERLRE  180
RDGGGGGAAT ATASSSSCNG GGRELDDDKR NVVDVEPPES CVLGGTACGT PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-27HD-ZIP family protein