PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG056120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 247aa    MW: 27600.7 Da    PI: 5.7327
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG056120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox611.9e-1951104456
                       -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       +++ft+eq++ Le++F+  + ++  +e++eLA++lgL+ rqV +WFqN+Ra+++
  TRIDC2AG056120.2  51 KRRFTEEQTRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 104
                       458**************9899********************************9 PP
2HD-ZIP_I/II123.41.1e-3949142193
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       e+krr+++eq ++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ +L+++l+
  TRIDC2AG056120.2  49 ERKRRFTEEQTRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFTALRADYDALHSRVESLKHEKLALAAQLQ 141
                       69******************999********************************************************************98 PP

       HD-ZIP_I/II  93 e 93 
                       e
  TRIDC2AG056120.2 142 E 142
                       7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDYHHHHQQQ QQFLMPPPAS LPAQQQLCAP MMEEQLCFVG RGGGGRGAER KRRFTEEQTR  60
SLESMFHAHH AKLEPREKAE LARELGLQPR QVAIWFQNKR ARWRSKQLEH DFTALRADYD  120
ALHSRVESLK HEKLALAAQL QELSERLRER DGGGGGAATA TASSSSCNGG GRELDDDKRN  180
VVDVEPPESC VLGGTACGTP ADVSASVESE CDDHLHYDGA VFPESFCATP ELWEPWPWPP  240
VEWNAVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.28e-28HD-ZIP family protein