PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG056640.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 430aa    MW: 47002.6 Da    PI: 7.5347
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG056640.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.42.3e-14741135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  TRIDC2AG056640.3  7 CCHCGVTSTPLWRNGPTHKPVLCNACGSRWRTKGS 41
                      99**************99999***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MGKEGPCCHC GVTSTPLWRN GPTHKPVLCN ACGSRWRTKG SLENYTPMHS RDDIDADQPR  60
VSKLKPPTLR LEEQRQLKKR PSHSIRENGA FSDQNFWKMG DADPSRSSSG SALSYSESCA  120
PYGSADASEM TGSAQSHAWE SLVPSKKRSC VTRTKSSSVD MLVKDLHCIM HEEQLSYLSG  180
SSEEDLIYHS ATPVDSFEIG YGSMLLRSSN SKSAEEDSEA NSVPADNKSY LTSESYSGTA  240
SFVVHSESKG ASNSNASPEK PKWFPVHTHE IAKRGKLHYS KQHTLENGEG TKETGGNENT  300
SALKDLTKST MKPLKRPHES QLQSCPEGTM RIAKKVCKSV AMAPQFKGSF LPKSGGAPFN  360
LLMLPPDKIS MLAPPQYMDN SDQDLLLEVP LNARQPEAEL LCQPFQLSSV TRSSTSADVV  420
ADGEGRLKQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.37e-58GATA family protein