PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG057010.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 406aa MW: 43324.3 Da PI: 6.7513

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG057010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	93.5	1.5e-29	102	190	1	85
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+kv tpsdv+k++rlv+pk++ae++ +e++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F + TRIDC2AG057010.1 102 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldAAANEKGLLLSFEDRGGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 190 89*************************955556888**********************************************854 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
GAMEFTAASS SSRLSKEGDE EEEGEEMEEE EASPREIPFM TAMTAAASSS SPTSASASSS 60 AAAASASASG SGSPFRSSDG AGASGSGAGG GDVEVIDKEH MFDKVVTPSD VGKLNRLVIP 120 KQHAEKYFPL DAAANEKGLL LSFEDRGGKL WRFRYSYWNS SQSYVMTKGW SRFVKEKRLD 180 AGDTVSFCRG AADATRDRLF IDWKRRAELR DPHRLARLPM PMPTSSPYGP WGAGPGGFFM 240 PPAPPATLYE HHRLRQGFDF RSISPAAPPR PQVLYFGSAG IFPHATMPPP QPQPPLHIAV 300 QPSPPVTVGM PMVLDSTPLV NSPTAAAKRV RLFGVNLDNP HTHGGESSND ANALSLRMPG 360 WQRPTPFRSL ELPQHGAAGA ESSAASSPSS SSSSKREAHS SLDLDL

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

GAMEFTAASS SSRLSKEGDE EEEGEEMEEE EASPREIPFM TAMTAAASSS SPTSASASSS  60
AAAASASASG SGSPFRSSDG AGASGSGAGG GDVEVIDKEH MFDKVVTPSD VGKLNRLVIP  120
KQHAEKYFPL DAAANEKGLL LSFEDRGGKL WRFRYSYWNS SQSYVMTKGW SRFVKEKRLD  180
AGDTVSFCRG AADATRDRLF IDWKRRAELR DPHRLARLPM PMPTSSPYGP WGAGPGGFFM  240
PPAPPATLYE HHRLRQGFDF RSISPAAPPR PQVLYFGSAG IFPHATMPPP QPQPPLHIAV  300
QPSPPVTVGM PMVLDSTPLV NSPTAAAKRV RLFGVNLDNP HTHGGESSND ANALSLRMPG  360
WQRPTPFRSL ELPQHGAAGA ESSAASSPSS SSSSKREAHS SLDLDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	2e-65	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG057010.1