PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 560aa MW: 62000.3 Da PI: 4.9561

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.8e-13	397	444	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2AG059100.1 397 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETITYLRELE 444 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
FLPGRQEGNS VVMALPVVRP CQEEPTLPPP TGTQFSNQLA AAVRSINWSY AIFWSISTSR 60 PGVLTWKDGF YNGEIKTRKV TSSADITADQ LVLQRSEQLR ELYESLLSGQ CDHRARRPAA 120 ALSPEDLGDA EWYYTVCMGY AFRPGQGLPG RSFASNEHVW LCNAQCADTK TFQRALLAKT 180 ASIQTVACIP LMGGVLELGT TNTVLEDKGM VNWIGTSFWE LKFPTCSKSE EPNSIPSVDD 240 TGDADIVFDV LNHNTMAMMI PRELELGEVE CLSDDNLERI TKEINGFYGL YDELDVGALE 300 ENWTMGGCFE IMSSPEVPPA RAATNGITNG AVTLSSVEPS RSSCFTAWKR SWDSAEDMAT 360 LVARETQKLL KKALAGGAWE NNGGDDTARA QESTNTKNHV ISERRRREKL NEMFLILKSL 420 VPSIHKVDKA SILAETITYL RELEQKVEEL GSNRAAITTA VRKRHEVGGK KVLARSKRKA 480 SELGGDDTER VLPKDDGLSS VINITVTDNE VLLEVQCRWK ELLMTQVFDA IKSLRLDVLS 540 VRASTPDDLL ALKIRAQVWE

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

FLPGRQEGNS VVMALPVVRP CQEEPTLPPP TGTQFSNQLA AAVRSINWSY AIFWSISTSR  60
PGVLTWKDGF YNGEIKTRKV TSSADITADQ LVLQRSEQLR ELYESLLSGQ CDHRARRPAA  120
ALSPEDLGDA EWYYTVCMGY AFRPGQGLPG RSFASNEHVW LCNAQCADTK TFQRALLAKT  180
ASIQTVACIP LMGGVLELGT TNTVLEDKGM VNWIGTSFWE LKFPTCSKSE EPNSIPSVDD  240
TGDADIVFDV LNHNTMAMMI PRELELGEVE CLSDDNLERI TKEINGFYGL YDELDVGALE  300
ENWTMGGCFE IMSSPEVPPA RAATNGITNG AVTLSSVEPS RSSCFTAWKR SWDSAEDMAT  360
LVARETQKLL KKALAGGAWE NNGGDDTARA QESTNTKNHV ISERRRREKL NEMFLILKSL  420
VPSIHKVDKA SILAETITYL RELEQKVEEL GSNRAAITTA VRKRHEVGGK KVLARSKRKA  480
SELGGDDTER VLPKDDGLSS VINITVTDNE VLLEVQCRWK ELLMTQVFDA IKSLRLDVLS  540
VRASTPDDLL ALKIRAQVWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	403	408	ERRRRE
2	404	409	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-85	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059100.1