PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 403aa MW: 44740.8 Da PI: 4.7312

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.6e-13	240	287	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2AG059100.3 240 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETITYLRELE 287 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MHFITCAYCS DQISQPNCTY LGSHFFQTVA CIPLMGGVLE LGTTNTVLED KGMVNWIGTS 60 FWELKFPTCS KSEEPNSIPS VDDTGDADIV FDVLNHNTMA MMIPRELELG EVECLSDDNL 120 ERITKEINGF YGLYDELDVG ALEENWTMGG CFEIMSSPEV PPARAATNGI TNGAVTLSSV 180 EPSRSSCFTA WKRSWDSAED MATLVARETQ KLLKKALAGG AWENNGGDDT ARAQESTNTK 240 NHVISERRRR EKLNEMFLIL KSLVPSIHKV DKASILAETI TYLRELEQKV EELGSNRAAI 300 TTAVRKRHEV GGKKVLARSK RKASELGGDD TERVLPKDDG LSSVINITVT DNEVLLEVQC 360 RWKELLMTQV FDAIKSLRLD VLSVRASTPD DLLALKIRAQ VWE

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MHFITCAYCS DQISQPNCTY LGSHFFQTVA CIPLMGGVLE LGTTNTVLED KGMVNWIGTS  60
FWELKFPTCS KSEEPNSIPS VDDTGDADIV FDVLNHNTMA MMIPRELELG EVECLSDDNL  120
ERITKEINGF YGLYDELDVG ALEENWTMGG CFEIMSSPEV PPARAATNGI TNGAVTLSSV  180
EPSRSSCFTA WKRSWDSAED MATLVARETQ KLLKKALAGG AWENNGGDDT ARAQESTNTK  240
NHVISERRRR EKLNEMFLIL KSLVPSIHKV DKASILAETI TYLRELEQKV EELGSNRAAI  300
TTAVRKRHEV GGKKVLARSK RKASELGGDD TERVLPKDDG LSSVINITVT DNEVLLEVQC  360
RWKELLMTQV FDAIKSLRLD VLSVRASTPD DLLALKIRAQ VWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	251	ERRRRE
2	247	252	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	5e-33	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059100.3