PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059100.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 399aa MW: 44192.3 Da PI: 4.779

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059100.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.6e-13	236	283	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2AG059100.4 236 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETITYLRELE 283 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MMSTMYGAHA CYLCRLNQTA SIQTVACIPL MGGVLELGTT NTVLEDKGMV NWIGTSFWEL 60 KFPTCSKSEE PNSIPSVDDT GDADIVFDVL NHNTMAMMIP RELELGEVEC LSDDNLERIT 120 KEINGFYGLY DELDVGALEE NWTMGGCFEI MSSPEVPPAR AATNGITNGA VTLSSVEPSR 180 SSCFTAWKRS WDSAEDMATL VARETQKLLK KALAGGAWEN NGGDDTARAQ ESTNTKNHVI 240 SERRRREKLN EMFLILKSLV PSIHKVDKAS ILAETITYLR ELEQKVEELG SNRAAITTAV 300 RKRHEVGGKK VLARSKRKAS ELGGDDTERV LPKDDGLSSV INITVTDNEV LLEVQCRWKE 360 LLMTQVFDAI KSLRLDVLSV RASTPDDLLA LKIRAQVWE

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MMSTMYGAHA CYLCRLNQTA SIQTVACIPL MGGVLELGTT NTVLEDKGMV NWIGTSFWEL  60
KFPTCSKSEE PNSIPSVDDT GDADIVFDVL NHNTMAMMIP RELELGEVEC LSDDNLERIT  120
KEINGFYGLY DELDVGALEE NWTMGGCFEI MSSPEVPPAR AATNGITNGA VTLSSVEPSR  180
SSCFTAWKRS WDSAEDMATL VARETQKLLK KALAGGAWEN NGGDDTARAQ ESTNTKNHVI  240
SERRRREKLN EMFLILKSLV PSIHKVDKAS ILAETITYLR ELEQKVEELG SNRAAITTAV  300
RKRHEVGGKK VLARSKRKAS ELGGDDTERV LPKDDGLSSV INITVTDNEV LLEVQCRWKE  360
LLMTQVFDAI KSLRLDVLSV RASTPDDLLA LKIRAQVWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	247	ERRRRE
2	243	248	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	6e-33	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059100.4