PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059170.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 360aa MW: 39140.3 Da PI: 4.9332

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	180	227	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f ++l+P+ + K++Ka+iL +++ Y+++L+ TRIDC2AG059170.1 180 KNHVISERRRREKLNEMFLIFKSLVPSiD------KVDKASILAETIAYLRELE 227 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
FWDLKFPTCS KSEEPNSSPS VDDTGDADIV FDVLNHDTMA TMITGELEPG EVECLSDGNL 60 ERITKETNGF CGLCDELDVG ALEENWIMGG SFEVMSSPEA PPAPVATDRV TSGAVAFSSV 120 GPSHPSCFAA WKRSWHSAED VVVPVTGESQ KLLKKALAGG AWTNNGDDGT TRAQESTNTK 180 NHVISERRRR EKLNEMFLIF KSLVPSIDKV DKASILAETI AYLRELEQKV EELESNKAAG 240 TTVVRKRHEV GGKKVLAGSK RKASELGGED TPLPKDGPSN IVNVTVTDKE VLLEVQCRWK 300 ELLMTQVFDA IKSLRLDVLS VRASTPDGLL ALKIRAQFAG PGAVEPGMIS EALQKAMRRR

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

FWDLKFPTCS KSEEPNSSPS VDDTGDADIV FDVLNHDTMA TMITGELEPG EVECLSDGNL  60
ERITKETNGF CGLCDELDVG ALEENWIMGG SFEVMSSPEA PPAPVATDRV TSGAVAFSSV  120
GPSHPSCFAA WKRSWHSAED VVVPVTGESQ KLLKKALAGG AWTNNGDDGT TRAQESTNTK  180
NHVISERRRR EKLNEMFLIF KSLVPSIDKV DKASILAETI AYLRELEQKV EELESNKAAG  240
TTVVRKRHEV GGKKVLAGSK RKASELGGED TPLPKDGPSN IVNVTVTDKE VLLEVQCRWK  300
ELLMTQVFDA IKSLRLDVLS VRASTPDGLL ALKIRAQFAG PGAVEPGMIS EALQKAMRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	191	ERRRRE
2	187	192	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	4e-39	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059170.1