PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059630.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 294aa MW: 31101.1 Da PI: 8.7788

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059630.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00082	162	184	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+k+F++ L H +H TRIDC2AG059630.2 162 FQCPACKKVFRSYQALGGHRASH 184 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MAKNTCKLCC RRFASPRALA GHMRSHSVKV ARPQQISSAS SASTSVAAAE DDARMAIQAH 60 VLRGKPKRRA RLAESDFSDR ESEAEYPSQS PGAKRVHAGS RDAEPVSSVS DAATPEEDVA 120 RSLMMLSRDS WPAPPPSYRA ADSDDAEAAP APPAAEQKRT RFQCPACKKV FRSYQALGGH 180 RASHVRGGRG GCCAPPLNPP PASTHLQPLP ECEEGTKPPP HPHECPCCSR VFASGQALGG 240 HKRPQLRPAA AAVAAHPAAA MKSLGLIDLN LPAPFEDVEL SAVSDPFLAA RPGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	1e-30	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059630.2