PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG059730.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 180aa    MW: 19617 Da    PI: 12.4291
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG059730.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP48.72e-151311624577
                       TTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP  45 qCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                        C  fh++ efD++krsCrrrLa+hnerrrk++
  TRIDC2AG059730.3 131 AC-SFHAMAEFDDAKRSCRRRLAGHNERRRKSN 162
                       34.5***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
LASSSSTCSR SSLASSWGSA RAPCPAARWL WLRSTGAEAA AGVPRWRARG RRRRPGRRQR  60
RPCRGARWKG ATWRWRGPRS TTGGTRCARR TPRRPGSSCT APSSASASNA AVRAESLSCA  120
SVDSLLCVYN ACSFHAMAEF DDAKRSCRRR LAGHNERRRK SNASDAMARG SAHAHGNPRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15259RRRPGRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.16e-12SBP family protein