PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059930.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 332aa MW: 36650.1 Da PI: 8.4841

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059930.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.2	6.8e-12	25	70	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEd l++ v+ +G+++W++I ++ + Rt+k+c++rw + TRIDC2AG059930.2 25 KGPWMAEEDAVLLEHVRTHGPRDWSSIRSKGALQRTGKSCRLRWVN 70 79***********************998889*********87 PP
2	Myb_DNA-binding	37.4	5.7e-12	81	121	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++E+ +++ +q+G++ W++Ia ++ gRt++++k++w TRIDC2AG059930.2 81 KFSADEERVVIELQAQFGNK-WARIATYLA-GRTDNDVKNFWS 121 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MARAPGGAAR RRGGRRDGGG EAVRKGPWMA EEDAVLLEHV RTHGPRDWSS IRSKGALQRT 60 GKSCRLRWVN KLRPNLKTGC KFSADEERVV IELQAQFGNK WARIATYLAG RTDNDVKNFW 120 STRQKRLARL LRAPLRARPS KTRSSNTKAP ASSLESAMER QGSCHDHVPS VGNSSGGQSF 180 PAAPPMEHQD TARISHDQMC SGFLSFEPLP LQAAAPSTTE GEASSSNAAY YQLAPESSFY 240 HHPYHLLEFP GLPERCGVDP GFVGASAMDD LAYHDLLPPL HPAPMMMPFF GMEYSRDGIK 300 VETRENFFDD LPPDVFDSFD QVPPPFSPSA TN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	20	GGRRDGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	6e-61	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059930.2