PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059930.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 192aa MW: 21255.1 Da PI: 11.7864

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059930.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.4	2.8e-12	25	70	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEd l++ v+ +G+++W++I ++ + Rt+k+c++rw + TRIDC2AG059930.3 25 KGPWMAEEDAVLLEHVRTHGPRDWSSIRSKGALQRTGKSCRLRWVN 70 79***********************998889*********87 PP
2	Myb_DNA-binding	38.6	2.4e-12	81	121	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++E+ +++ +q+G++ W++Ia ++ gRt++++k++w TRIDC2AG059930.3 81 KFSADEERVVIELQAQFGNK-WARIATYLA-GRTDNDVKNFWS 121 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MARAPGGAAR RRGGRRDGGG EAVRKGPWMA EEDAVLLEHV RTHGPRDWSS IRSKGALQRT 60 GKSCRLRWVN KLRPNLKTGC KFSADEERVV IELQAQFGNK WARIATYLAG RTDNDVKNFW 120 STRQKRLARL LRAPLRARPS KTRSSNTKAP ASSLESAMTL NFERQGSCHD HVPSVGNSSG 180 GQSFPAAPPM EH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	20	GGRRDGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059930.3