PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG059990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 131aa MW: 14494.3 Da PI: 8.9673

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.7e-19	65	116	2	53
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rk+ +++k+q +Le+ F+++++++ ++++ LA++lgL rqV vWFqNrRa TRIDC2AG059990.2 65 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRA 116 788899*********************************************9 PP
2	HD-ZIP_I/II	78.7	9.7e-26	65	116	1	52
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRA 52 +kk+rlsk+q+++LE+sF+e+ +L+p++K++la++Lgl+ rqv+vWFqnrRA TRIDC2AG059990.2 65 RKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRSRQVEVWFQNRRA 116 69*************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
LSLSSSLAPR THHVAMLLHA PERRLLEMPL LPAKRVCEVS ADEERSGQRG GSDDEDGGCG 60 MDGSRKKLRL SKDQSAVLED SFREHPTLNP RQKAALAQQL GLRSRQVEVW FQNRRASLCD 120 FVSASSNLGR S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	70	SRKKLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	2e-31	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059990.2