PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060230.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 120aa    MW: 13063.7 Da    PI: 10.6149
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060230.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-191262255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t  eAa+a+++a+  ++g
  TRIDC2AG060230.3 12 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTSVEAARAYDRAAFGMRG 62
                      8********.**********96554..**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
APAPAPVEDL RKYRGVRQRP WGKYAAEIRD PKRRGSRVWL GTYDTSVEAA RAYDRAAFGM  60
RGAKAILNFP NEVGTRGAEL WAPPPSGPAS QTAGATNKRK RSQDEDADVE VTGVVINKAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-35ERF family protein