PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG060480.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 860aa MW: 97455.4 Da PI: 8.6657

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG060480.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.7e-21	190	273	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2AG060480.2 190 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 273 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 860 aa Download sequence
MATTSGGGAA GDPAASSPAP SQPQHPTPRI SHIVRTYLDL SSNSKKRRAA RKNQLKPGGV 60 ETSAAGENKG CGPSGAASLE HSRLLRELGI RVSRYTNEER RDIITRYMQK RSGRQGVNRA 120 AAKVPSRQAL AERRRRSVGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM 180 VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPYPE 240 TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI 300 PPRYKNYLRT KPTKDMNAGD FRDLTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS 360 IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GINHHRQMVI FGAAFLYDET AESFKWLLET 420 FKVAMCGKQP KTILTDQSAA LKEALDLAWP GTVHRYCLWQ IYQDAVKSLA HVFCISEEFT 480 HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE DRENWALPYG RQIFSGDIKS 540 MVRAETLGIR MKEYLDCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ 600 AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT FKNRTKEQLV RFDSSDGTVA 660 CTCKKFETAG ILCCHILKVY ELKNVKEIPL QYLLKRWSKD AKLGTVHEIN GFSFDSHIGS 720 CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSVVHSIK 780 DQLTRMVQND YPLGNSSEPQ KSTGKKMSEV TRRGNCQETN KRQKQRKGHS GEAAAGPRER 840 EVNVTDQFLP DQPMQVNSST

Sequence ? help Back to Top

Protein Sequence Length: 860 aa Download sequence

MATTSGGGAA GDPAASSPAP SQPQHPTPRI SHIVRTYLDL SSNSKKRRAA RKNQLKPGGV  60
ETSAAGENKG CGPSGAASLE HSRLLRELGI RVSRYTNEER RDIITRYMQK RSGRQGVNRA  120
AAKVPSRQAL AERRRRSVGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM  180
VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPYPE  240
TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI  300
PPRYKNYLRT KPTKDMNAGD FRDLTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS  360
IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GINHHRQMVI FGAAFLYDET AESFKWLLET  420
FKVAMCGKQP KTILTDQSAA LKEALDLAWP GTVHRYCLWQ IYQDAVKSLA HVFCISEEFT  480
HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE DRENWALPYG RQIFSGDIKS  540
MVRAETLGIR MKEYLDCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ  600
AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT FKNRTKEQLV RFDSSDGTVA  660
CTCKKFETAG ILCCHILKVY ELKNVKEIPL QYLLKRWSKD AKLGTVHEIN GFSFDSHIGS  720
CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSVVHSIK  780
DQLTRMVQND YPLGNSSEPQ KSTGKKMSEV TRRGNCQETN KRQKQRKGHS GEAAAGPRER  840
EVNVTDQFLP DQPMQVNSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG060480.2