PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060480.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 196aa    MW: 22568.6 Da    PI: 9.642
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060480.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.34.4e-221194190
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      k+Y +YA +vGFsvrk    k+ ++g   +r +vCs+eg+r+++  k     r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la
  TRIDC2AG060480.3 11 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 94
                      69********************8888.8999***********98877.....9***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MVFESEEKAC KYYVSYAGNV GFSVRKGLWD KTAKSGSRSR FYVCSREGFR AKNLPKRPYP  60
ETRTGCPARF SIMLTPSGKY RVTEFVQDHN HQLAGPIDIG MLKSQRLLSK VQSGNGNAIS  120
IPPRYKNYLR TKPTKDMNAG DFRDLTDYFR SMKSDNPSFY YAIQVDENDK AANVFWADAR  180
SIFDYHYFSD VICFDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-37FAR1 family protein