PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060480.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 232aa    MW: 26229.6 Da    PI: 8.7876
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060480.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.86.5e-2246129190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       k+Y +YA +vGFsvrk    k+ ++g   +r +vCs+eg+r+++  k     r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la
  TRIDC2AG060480.4  46 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 129
                       69********************8888.8999***********98877.....9***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
PRQGGPADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS YAGNVGFSVR  60
KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPYPETRTG CPARFSIMLT PSGKYRVTEF  120
VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPPRY KNYLRTKPTK DMNAGDFRDL  180
TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD MT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-38FAR1 family protein