PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG060480.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 206aa    MW: 23181.2 Da    PI: 9.3972
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG060480.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.25e-2242125190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       k+Y +YA +vGFsvrk    k+ ++g   +r +vCs+eg+r+++  k     r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la
  TRIDC2AG060480.5  42 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 125
                       69********************8888.8999***********98877.....9***********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
QTADKPEEKA EEEPELPPEV VANAGGVPII GMVFESEEKA CKYYVSYAGN VGFSVRKGLW  60
DKTAKSGSRS RFYVCSREGF RAKNLPKRPY PETRTGCPAR FSIMLTPSGK YRVTEFVQDH  120
NHQLAGPIDI GMLKSQRLLS KVQSGNGNAI SIPPRYKNYL RTKPTKDMNA GDFRDLTDYF  180
RSMKSDNPSF YYAIQVDEND KAANVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-29FAR1 family protein