PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG062550.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 243aa MW: 26869.3 Da PI: 10.0917

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG062550.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	120	164	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2AG062550.2 120 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 164 79****************************************997 PP
2	QLQ	59.9	7.2e-21	59	94	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2AG062550.2 59 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 94 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
RERAAYMAMP FASLSPAADH HRSSPIFPFC RSSPLYSQQQ QQQQHAMSGA RWAAARPATF 60 TAAQYEELEQ QALIYKYLVA GVPVPPDLLL PIRRGFDSLA SRFYHHHALG YGSYFGKKLD 120 PEPGRCRRTD GKKWRCSKEA AQDSKYCERH MHRGRNRSRK PVETQLVSHS QQLQQQAPAA 180 AFHGHSPYPA IATGAGAPGS FALGSTAQLH MDNAAAPYAT AGAAGNKDFR SSCFKNVQQQ 240 LLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG062550.2