PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG062690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 209aa    MW: 24701.7 Da    PI: 7.5107
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG062690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.61.8e-091384586
          trihelix 45 rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      r++ qCk+kw+nl +ryk  ++++ +    + ++cp+f++l+
  TRIDC2AG062690.1  1 RTADQCKCKWKNLVNRYKGKETSDPE----TGRQCPFFEELH 38
                      899****************9999997....4678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
RTADQCKCKW KNLVNRYKGK ETSDPETGRQ CPFFEELHAV FTERAKNMQR QLLQSESGTS  60
VKKKLKRPSG DQSSGESDEN EYGVEVSDDE KPVISKKRKA GDKGQPSQRM AENSRAGSSS  120
IHDLLQEFLV QQQHVDMLWH ETMERRAQER LIFEQEWRQS MQKLEQERLM LEQSWIEREE  180
QRRMREEARA QKRDSLMTTL LNKLLQEDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16399KKLKRPSGDQSSGESDENEYGVEVSDDEKPVISKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.13e-23Trihelix family protein