PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG063920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 321aa    MW: 35222.9 Da    PI: 6.2798
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG063920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.6e-141564148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+ lv+ +++ Gg+  +W+  ++  g++R+ k+c++rw +yl
  TRIDC2AG063920.1 15 KGPWTEEEDKTLVEHIQKRGGHvgSWRGMPKAAGLNRCSKSCRLRWTNYL 64
                      79**********************************************97 PP
2Myb_DNA-binding51.91.8e-1670114147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++ +E+ l++ +++ +G++ W+tIa ++  gRt++++k++w+++
  TRIDC2AG063920.1  70 RGNFSDDEERLIITLHAGHGNK-WATIATHLE-GRTDNEIKNHWNTH 114
                       89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRSPCCCHD VGVKKGPWTE EEDKTLVEHI QKRGGHVGSW RGMPKAAGLN RCSKSCRLRW  60
TNYLRPDIKR GNFSDDEERL IITLHAGHGN KWATIATHLE GRTDNEIKNH WNTHIRKKLL  120
RMGVDPVTHQ QLPPDHQLDG SSAALLPEAL LWAAAAATLG GLDIGALRQA QLLQHLLQAG  180
SNNDATNLVA NLMAASNVGL NSSNSIVPNI LLQDKFNMLP GTNYLQPGYL CNTSNFAEQD  240
VVQQQLINAM SPGTSSFAAA EPADQLCNTA AFTARDIAPG IDMLPVQEFA GLMEPMEQLP  300
NLCSLESDSF WKELLEDGYR L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.22e-65MYB family protein