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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG064060.2 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | bHLH | ||||||||
| Protein Properties | Length: 337aa MW: 36104.1 Da PI: 6.627 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 42.3 | 1.4e-13 | 95 | 146 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+
TRIDC2AG064060.2 95 QRMTHIAVERNRRRQMNEYLAVLRSLMPES---YAHRGDQASIVGGAIDFVKELE 146
79****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 337 aa Download sequence |
SPIDRIGMTL DALCAAGDVL VYDTFNAAAA VSAAPAESSL LFCDVAGAAW MAGSAAAEAP 60 AVTIVPVEEG EKAQGRRKRR RRARSCKNRE DAESQRMTHI AVERNRRRQM NEYLAVLRSL 120 MPESYAHRGD QASIVGGAID FVKELEQLLQ SLEAQKRTLL AQPQQEHKPL PIRDAMPSSS 180 KTVTAAATTT TSSGSGEGKQ ASAMREGMGP PFAGFFTYPQ YVCRLPPRDD ADDRAGAADI 240 EVTLVETHAN VRVMAPRRPG QLLRMVAGME ALRLTVLHLN VTTLGSLALY SLSVKVEEGC 300 GPTTADDIAA AVHHVLCLVD AEATSQRLLA GGQQEIL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 76 | 82 | RRKRRRR |
| 2 | 77 | 81 | RKRRR |
| 3 | 77 | 84 | RKRRRRAR |
| 4 | 96 | 107 | RMTHIAVERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G72210.1 | 1e-59 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG064060.2 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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