PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG065540.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 253aa    MW: 28571 Da    PI: 9.0029
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG065540.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B392.33.6e-2936140198
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k+ltpsdv+k++rlv+pk++ae++             ++  l++ede ++ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F+++
  TRIDC2AG065540.5  36 FEKTLTPSDVGKLNRLVIPKQHAERYfplnggdsP--GDKDLLLSFEDEASKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERV 126
                       99****************************76332..235667999*********************************************88 PP

                       SS.SEE..EEEEE- CS
                B3  86 gr.sefelvvkvfr 98 
                       +   ++  ++  +r
  TRIDC2AG065540.5 127 RGlGTGDRLFICCR 140
                       66544444444443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAMHHLSQGH PQAWPWGVAM YTNLHYHHQY EREHLFEKTL TPSDVGKLNR LVIPKQHAER  60
YFPLNGGDSP GDKDLLLSFE DEASKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI  120
VHFERVRGLG TGDRLFICCR RRGKSALPPP VRVSPPALNA GEQQPWSPMC YSTSGSYPTS  180
PANSHAYRRD SPREANAKSS TASGPPSRRL RLFGVNLDCG PEPEAEAATP MYDYTHQSPY  240
AAVVTVPAYW ASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.23e-56B3 family protein