PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG065650.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 186aa    MW: 21481.5 Da    PI: 9.4369
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG065650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.11.3e-172368555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      hn  ErrRRd+iN+++  L+ellP++     +K +K+++L +A++Y+ksLq
  TRIDC2AG065650.1 23 HNFSERRRRDKINEKLKALQELLPNC-----TKTDKVSMLDEAIDYLKSLQ 68
                      99************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEDGRALRRM SIPTRRSRSA DFHNFSERRR RDKINEKLKA LQELLPNCTK TDKVSMLDEA  60
IDYLKSLQLQ LQMLVMGKGM APVVPPELQQ YMHYITTDPA AQLMQMPPSE PPRPFQITHA  120
NPPQRESDFL SQMQNHLHPS DQPQINFLRP PKLQLYTPEQ RGVVGSSSGH NGGWIPERNS  180
SYNFME
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732ERRRRD
22833RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.26e-30bHLH family protein