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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC2AG065740.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 189aa MW: 21187.1 Da PI: 9.9557 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 161.8 | 2.6e-50 | 12 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhP+d+elv +yL++k++g v + +vd++k+ePw+Lp ++ + kewyfFs++d+kyatg+r+nrat++gyWkatgkd+
TRIDC2AG065740.1 12 LPPGFRFHPRDHELVLDYLCHKLSGGGgRGGGGVdMVDVDLNKCEPWELPDAACVGGKEWYFFSRHDRKYATGQRTNRATHTGYWKATGKDRV 104
79**********************999533334569999***********7666789************************************ PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ ++vg++ktLvfy grap+g+kt+Wvmhe+r+
TRIDC2AG065740.1 105 ITGDgAAAVVGMRKTLVFYLGRAPRGTKTEWVMHEFRV 142
**9755667***************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 189 aa Download sequence |
MSSSMSMVEA RLPPGFRFHP RDHELVLDYL CHKLSGGGGR GGGGVDMVDV DLNKCEPWEL 60 PDAACVGGKE WYFFSRHDRK YATGQRTNRA THTGYWKATG KDRVITGDGA AAVVGMRKTL 120 VFYLGRAPRG TKTEWVMHEF RVEGRPPRSV HRQLATPHDG SPPFLLEVRV PLLHFMHATR 180 SDDRRGSTL |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 36 | 44 | GGGGRGGGG |
| 2 | 37 | 45 | GGGGRGGGG |
| 3 | 38 | 46 | GGGGRGGGG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G12977.1 | 1e-65 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC2AG065740.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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