PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG065740.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 160aa MW: 17961.4 Da PI: 10.0092

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG065740.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.6	1.5e-50	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhP+d+elv +yL++k++g v + +vd++k+ePw+Lp ++ + kewyfFs++d+kyatg+r+nrat++gyWkatgkd+ TRIDC2AG065740.4 11 LPPGFRFHPRDHELVLDYLCHKLSGGGgRGGGGVdMVDVDLNKCEPWELPDAACVGGKEWYFFSRHDRKYATGQRTNRATHTGYWKATGKDRV 103 79********************999533334569999*******7666789******************************** PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++vg++ktLvfy grap+g+kt+Wvmhe+r+ TRIDC2AG065740.4 104 ITGDgAAAVVGMRKTLVFYLGRAPRGTKTEWVMHEFRV 141 9755667***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
SSSMSMVEAR LPPGFRFHPR DHELVLDYLC HKLSGGGGRG GGGVDMVDVD LNKCEPWELP 60 DAACVGGKEW YFFSRHDRKY ATGQRTNRAT HTGYWKATGK DRVITGDGAA AVVGMRKTLV 120 FYLGRAPRGT KTEWVMHEFR VEGRPPRSVH YNKKWNPAPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	43	GGGGRGGGG
2	36	44	GGGGRGGGG
3	37	45	GGGGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12977.1	1e-65	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG065740.4