PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG068320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 297aa    MW: 31643.4 Da    PI: 8.258
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG068320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-052472841254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIDC2AG068320.2 247 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 284
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
TTTASSESPG NNSSVTFQET ASISDPAAGF TDWNSPYMSN GGAGNMHGFL QVGHHDMSSR  60
TDQQSHMNAS SMLNDPSANK LDLALQGHQQ AGDHHRQQKL LSSLGAPELL LSPNSPYGFQ  120
SSSLLRSLLE PMAKPAPAAG IQQYQYQQMG GQAGVREPLQ FTNDAAFWNP SAGFGMAMPA  180
PAVSEQTSVR AVKRPSPAPR GANLALKSVL EGVGDSSSIV TKKANSEPAF KKPRTETPSS  240
LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHETIEY IKFLHDQAGV SACAKCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.26e-28bHLH family protein