PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG072210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 236aa    MW: 26026.3 Da    PI: 7.4752
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG072210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.85.3e-11113193191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y++e GF ++  ks  + + +   +++ vC ++gk+  e+++         + +++C a + + + kd+ w++++ +  HnH+l+p
  TRIDC2AG072210.1 113 DFYNLYSYEKGFCICYGKSGLNVERT-KCMQEIVCGCSGKAGVENTR---------SCHCECPALIGLLRAKDNDWYIAEHRDTHNHSLSP 193
                       6*****************99995444.678899******99887555.........99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVVELPVLQQ ETSPSVHQAA SGHAQIVAGQ ASAGVRLESS PPSSELSTGK MTPRAPGWNK  60
RLRIGTAAPS RPPCPNRISA FEKAVRSFAD NPTETVITPA IGTTFDSVGE AYDFYNLYSY  120
EKGFCICYGK SGLNVERTKC MQEIVCGCSG KAGVENTRSC HCECPALIGL LRAKDNDWYI  180
AEHRDTHNHS LSPNFGETIH WPSHKHIDVY TRDLVNQLRQ NNVNLANVYN IIGFFW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.14e-08FAR1 family protein