PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG072270.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 174aa MW: 19982.3 Da PI: 8.7494

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG072270.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.6	6.5e-18	6	55	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g TRIDC2AG072270.9 6 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 55 78*****************......55**********************998 PP
2	AP2	45.3	2.1e-14	97	147	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2AG072270.9 97 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 147 89******.7**5553..2.26********************99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGMEADI 60 NFSLEDYDDI KQMGNLTKEE FVHVLRRQST GFPRGSSKYR GVTLHKCGRW EARMGQFLGK 120 KYVYLGLFDT EEEAARSYDR AAIKCNGKDA VTNFDPSTYA EEFEPAGQQS MDLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-96	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG072270.9