PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG072390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 203aa    MW: 22098.1 Da    PI: 6.9217
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG072390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-1454106155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR+++N+ +  Lr+llP  +   + kKls  +++ +A +YI +Lq
  TRIDC2AG072390.1  54 KKLSHNAYERDRRKQLNELYLSLRSLLPDtD---HTKKLSIPTTVCRALKYIPELQ 106
                       6789*************************55...7777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
FSGQLPPSPP WPNLDVDLDL DLDVLEDDIV RELSGRPANA ASSGSGSGGP GSHKKLSHNA  60
YERDRRKQLN ELYLSLRSLL PDTDHTKKLS IPTTVCRALK YIPELQKQVE NLEKKKEKLA  120
SANCKPGVLS VSGSIAPTVS ATCLNDKEIM VQISVSRDTD AATALPLSRC INVLENEGLQ  180
LISSSTSSTF GNKMFYNLHL QVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-30bHLH family protein